Topics Overview
Species and Food Webs
Puget Sound hosts more than 100 species of seabirds, 200 species of fish, 15 marine mammal species, hundreds of plant species, and thousands of invertebrate species (Armstrong et al. 1976; Thom et al. 1976; Canning and Shipman 1995). The array of species found in Puget Sound reflects its high productivity, the wide diversity of habitats present, and its unique geographic location at the interface of “northern” and “southern” ranges for many species. These species do not exist in isolation, but rather interact with each other in a variety of ways: they eat and are eaten by each other; they serve as vectors of disease or toxins; they are parasitic; and they compete with each other for food, habitat, and other resources.
There is no single food web in the Puget Sound ecosystem. Instead there are many marine food webs that reside in the soft-bottomed nearshore, in rocky-bottomed areas, in habitats dominated by eelgrass or kelp, and in pelagic areas as well. Similarly, there are terrestrial and freshwater aquatic food webs that occur in alpine habitats, mid-elevation and lowland forests, and rivers, lakes, and streams. The food webs in each of these areas are not discrete and independent, but rather are highly interconnected by organic matter sources, physical proximity, exchange of water, and organisms that change habitats during the course of their life cycles.
Food webs also change both in time and space due to variation in stratification, prey availability, organic-matter source availability and quality, and other local and regional conditions. In addition, some species occupy multiple places or play multiple roles in the food web depending on their life stage, size, habitats they occupy, and time of year.
Sources:
Sound Science: Synthesizing ecological and socioeconomic information about the Puget Sound ecosystem. Published 2007. Used by permission.
http://www.nwfsc.noaa.gov/research/shared/sound_science/documents/sound_science_finalweb.pdf
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Table 30. Species indicators for which targets have been established in Puget Sound and/or Washington state.
|
Species Indicator |
Target |
Achieved |
Reference |
|
Bald eagle |
Equilibrium population abundance is ~6,000 individuals in WA state |
Yes |
[303] |
|
Harbor seal |
Carrying capacity of 10,000-13,000 individuals (WA inland waters) |
Yes |
This section provides a brief summary of existing targets for Puget Sound including those for species, habitats, water quality, and water quantity.
This version of the Puget Sound Science Update provides an initial evaluation of habitat indicators, but is not intended to be comprehensive. Highlights include evaluation of marine and interface habitats (area and condition), as well as evaluation of a number of indicators of freshwater and terrestrial habitats condition. Many measures of habitat condition, especially those relating to water quality, were addressed under the PSP Water Quality goal.
This version of the Puget Sound Science Update provides an initial evaluation of food web indicators, but is not intended to be comprehensive. Highlights include the evaluation of individual species or species complexes as food web indicators due to their key functional roles (e.g., forage fish, jellyfish), and the identification of existing data sources for assessing food web structure and function at Washington State agencies and via satellite.
This version of the Puget Sound Science Update provides an initial evaluation of species indicators, but is not intended to be comprehensive. Focal species identified by O’Neill et al. (2008) were evaluated as either measures of population size or population condition. Many of these were identified as potentially good species indicators, and several may be relevant to key attributes of the other PSP goals (e.g., habitat condition).
Background
Giant Kelp (Macrocystis pyrifera). Photo by Claire Fackler. Courtesy of NOAA.
Background
Photo by Jaime Ramos. Courtesy National Science Foundation.
Background
Three distinct groups of killer whales (Orcinus orca) occupy the coastal waters of the northeastern Pacific. These groups—northern and southern residents, transients, and offshores—are distinguished by diet, behavior, morphology, and other characteristics. Among these, Southern Resident and transient killer whales commonly are found in Puget Sound. Northern residents and offshore killer whales rarely enter Puget Sound (Wiles 2004, Kriete 2007), and therefore are not described in detail here.
photo by Steve Hillebrand, courtesy of the U.S. Fish and Wildlife Service.
Background
Puget Sound is important for nesting, wintering, and migration of numerous bird species associated with the marine environment. More than 70 bird species regularly utilize Puget Sound during some or all stages of their life histories (Buchanan 2006), but only a portion of these are actively being investigated. Studies have focused primarily on abundance and distribution, habitat utilization, foraging behavior, and contamination levels.
Multispecies comparisons
Background
Bentho-pelagic fish utilize both demersal (bottom) habitats and shallower portion of the water column, often as part of diel migrations whereby fish feed in shallow water at night and move to deeper water to form schools during the day. Four currently or historically important species of bentho-pelagic fish in Puget Sound are the Pacific hake (Merluccius productus), the Pacific cod (Gadus macrocephalus), the Walleye pollock (Theragra chalcogramma) and the spiny dogfish (Squalus acanthias). Three of these species (Pacific hake, Pacific cod and Walleye pollock) were included in a petition for federal listing under the Endangered Species Act in 1999.
Pacific hake
Background
Forage fishes are small schooling fishes that form a critical link in the marine food web between zooplankton and larger fish and wildlife consumers. They occupy every marine and estuarine nearshore habitat in Washington, and much of the intertidal and shallow subtidal areas of the Puget Sound Basin are used by these species for spawning habitat. Status of forage fish populations can be an indicator of the health and productivity of nearshore systems (PSP 2009). Information on forage fish life history, distribution, and habitat preferences is summarized in Marine Forage Fishes of Puget Sound (Penttila 2007) and the Forage Fish Management Plan (Bargmann 1998).
Moon Jellyfish (Aurelia aurita) photo by Hans Hillewaert. Courtesy of U.S.G.S.
Photo by Dan Boone. Courtesy of U.S. Fish and Wildlife Service.
Background

Pacific Oyster (Crassostrea gigas). Photo by Don Rothaus. Courtesy of the Washington Department of Fish and Wildlife.
Editors
Scott F. Pearson1, Nathalie Hamel2, Steven Walters3, and John Marzluff3
Section Authors
Introduction: Scott F. Pearson1, Steven Walters3, and Nathalie Hamel2
Climate Change: Heather Cornell3
Residential, Commercial and Industrial Development: Steven Walters3
Shoreline Modification: Steven Walters3
Pollution: James West4
Invasive and Non-native Species: Heather Cornell3
Ecosystem Models and Their Evaluation: Scott F. Pearson1 and Steven Walters3
Conclusion: All authors contributed
Our objective in this section is to review the status and trends of biophysical components of Puget Sound that speak to the Puget Sound Partnerships key goals: species and food webs, habitats, water quality and water quantity. Each of these goals are multi-facetted, and a nearly limitless range of topics could be covered. Indeed, one of the qualities that make Puget Sound a natural treasure is the diversity of species and habitats that it supports. This diversity precludes detailed treatment of all ecosystem components and requires thoughtful selection of metrics that speak to ecological condition and policy goals.
Phillip S. Levin1, Andy James2, Jessi Kershner3, Sandra O’Neill1, Tessa Francis1, Jameal Samhouri1, Chris Harvey1, Michael T. Brett2, and Daniel Schindler3
topical_article
This paper discusses the impact of harbor seals on fish stocks in the San Juan Islands, where they are a year-round predator. Because larger animals have higher energetic needs, they may feed more frequently and at greater volume than smaller members of the same species. The impact of commercial and recreational fisheries on fish stocks is complicated by the presence of these predators.
The Washington Department of Fish and Wildlife recently released a Draft Bat Conservation Plan for the 15 species of bats found in Washington State. All but four of these species occur within the greater Puget Sound watershed1, including:
Browse a collection of shellfish photos provided by the Swinomish Tribe.
With funding from the EPA (EPA Interagency Agreement DW-13-923276-01), scientists at the Northwest Fisheries Science Center and the University of Washington used a field and quantitative modeling ‘source-transport-fate’ assessment approach to classify the vulnerability of shellfish growing areas to closures caused by watershed and marine-derived pathogens. Based on the historical prevalence of nutrient pollution, shellfish closures, and phytoplankton blooms in commercial and recreational shellfish growing area, the project focused on three nearshore sites--the Hamma Hamma (WRIA 16), Dosewallips (WRIA 16) and Samish (WRIA 3).
NOAA has released a draft report establishing a common monitoring and adaptive management framework for Chinook salmon recovery in Puget Sound.
The Puget Sound Recovery Implementation Technical Team has released a draft of a NOAA technical memorandum describing frameworks for adaptive management and monitoring of Chinook salmon in Puget Sound. Download the report.
Eelgrass (Zostera marina L.) is an aquatic flowering plant common in tidelands and shallow waters along much of Puget Sound’s shoreline. It is widely recognized for its important ecological functions, and provides habitat for many Puget Sound species such as herring, crab, shrimp, shellfish, waterfowl, and salmonids.
This is the executive summary from a technical report produced for the Puget Sound Nearshore Partnership on Valued Ecosystem Components (VEC). The entire document is included as a PDF with this summary.
This is the executive summary from a technical report produced for the Puget Sound Nearshore Partnership on Valued Ecosystem Components (VEC). The entire document is included as a PDF with this summary.
This is the executive summary from a technical report produced for the Puget Sound Nearshore Partnership on Valued Ecosystem Components (VEC). The entire document is included as a PDF with this summary.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
Canadian and U.S. governments differ on special status for bocaccio in the Salish Sea.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
The Tufted Puffin was considered common in Washington historically, with more than 40 nesting colonies documented along the outer coast, in the San Juan Islands, and the Strait of Juan de Fuca. However, more recent surveys have found nesting birds at only 17 sites, with severe declines in the Salish Sea region.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
This article originally appeared in Threatened and Endangered Species, State of Washington Annual Report 2011. Further information on these species and others in the Puget Sound basin is available at the Washington Department of Fish and Wildlife site and the Fish and Wildlife Service page on endangered species.
The Encyclopedia of Puget Sound species library now includes a list of species of concern in the Salish Sea watershed. The list was created by Joe Gaydos and Nicholas Brown of the SeaDoc Society, and was released as a paper presented as part of the Proceedings of the 2011 Salish Sea Ecosystem Conference in Vancouver, BC.
An indicator species is an organism whose presence, absence or abundance reflects a specific environmental condition. Indicator species can signal a change in the biological condition of a particular ecosystem, and thus may be used as a proxy to diagnose the health of an ecosystem. For example, plants or lichens sensitive to heavy metals or acids in precipitation may be indicators of air pollution. Indicator species can also reflect a unique set of environmental qualities or characteristics found in a specific place, such as a unique microclimate. However, care must be exercised in using indicator species.
The Sauk-Suiattle Indian Tribe conducts annual surveys of amphibian egg masses in the Reservation Slough wetland near the Sauk River.
There are at least 28 species of rockfish in the Salish Sea, but their populations have declined in the past several decades. The proceedings from a 2011 rockfish recovery workshop in Seattle are now available.
A recent report by an independent science panel reviewed data on the effects of salmon fisheries on Southern Resident Killer Whale populations. The report was released on November 30, 2012 and was commissioned by NOAA Fisheries and Oceans Canada.
Background
Three distinct groups of killer whales (Orcinus orca) occupy the coastal waters of the northeastern Pacific. These groups—northern and southern residents, transients, and offshores—are distinguished by diet, behavior, morphology, and other characteristics. Among these, Southern Resident and transient killer whales commonly are found in Puget Sound. Northern residents and offshore killer whales rarely enter Puget Sound (Wiles 2004, Kriete 2007), and therefore are not described in detail here.
Harbor seal numbers were severely reduced in Puget Sound during the first half of the twentieth century by a state-financed population control program. This bounty program ceased in 1960, and in 1972, harbor seals became protected under the federal Marine Mammal Protection Act and by Washington State.
The Puget Sound region has the highest densities of bald eagles in Washington. Breeding pairs initiate nesting activities in January or February.
More than 70 bird species regularly utilize Puget Sound during some or all stages of their life histories, but only a portion of these are actively being investigated.
Fish in the family Salmonidae (salmon, trout, and charr) play potentially integral roles in the upland freshwater, nearshore and pelagic marine ecosystems and food webs of Puget Sound.
Approximately 28 species of rockfish are reported from Puget Sound, spanning a range of life-history types, habitats, and ecological niches.
Bentho-pelagic fish utilize both bottom habitats and shallower portions of the water column, often feeding in shallow water at night and moving to deeper water to form schools during the day.
Recent worldwide increases in the abundance of some jellyfish have been associated with human-caused disturbances to the environment such as eutrophication, overfishing and climate warming.
Dungeness crabs are an important resource in Puget Sound for recreational, commercial, and tribal fisheries. They utilize a variety of habitats over the course of their lives, and are vulnerable to shifts in ocean temperature and water quality.
Pinto abalone are the only abalone species found in Washington State.
Many types of bivalves, both native and non-native, flourish in Puget Sound. These species are a crucial part of the Puget Sound ecosystem and are also important for commercial fisheries.
GIANT PACIFIC OCTOPUS (Enteroctopus dofleini) is the largest species of octopus in the world. It is found in the northern Pacific Ocean from the northwest coast of the continental United States to Japan, including Puget Sound.
The State of Our Watersheds Report is produced by the treaty tribes of western Washington, and seeks to present a comprehensive view of 20 watersheds in the Puget Sound region and the major issues that are impacting habitat.
Protection Island, a National Wildlife Refuge in the Strait of Juan de Fuca, provides important habitat for seabirds and marine mammals.
Forage fish occupy every marine and estuarine nearshore habitat in Washington, and much of the intertidal and shallow subtidal areas of the Puget Sound Basin are used by these species for spawning habitat.
Audio recordings of rhinoceros auklets on Protection Island.
Puget Sound Stream Benthos is a data management project which monitors benthic invertebrates in streams and rivers in the Puget Sound region. The system is maintained and operated by King County, and was the result of a joint effort between King, Pierce, and Snohomish Counties.
Puget Sound hosts more than 100 species of seabirds, 200 species of fish, 15 marine mammal species, hundreds of plant species, and thousands of invertebrate species. These species do not exist in isolation, but rather interact with each other in a variety of ways: they eat and are eaten by each other; they serve as vectors of disease or toxins; they are parasitic; and they compete with each other for food, habitat, and other resources.
Many consumer organisms in Puget Sound are both herbivores and detritivores. Zooplankton and benthic invertebrates that are scavengers, herbivores, or detritivores are considered jointly in this article. Some of these organisms can be predatory as well. Hundreds of invertebrates and fish species have a planktonic larval stage that eats plants and occupies the nearshore and offshore pelagic waters of Puget Sound.
A variety of animals, including invertebrates, fish, mammals, and birds, consume the suspension-feeders, filter-feeders, grazers, and detritivores that serve as a link between the primary producers and detrital pathways and the upper levels of the food web.
Fishes, birds, and mammals (including humans) serve as top-level carnivores in the Puget Sound ecosystem. With the exception of humans, these organisms have a diet that consists almost entirely of fish or other vertebrates.



