Freshwater habitat
Freshwater habitat in the Puget Sound region consists of rivers, marshes, streams, lakes and ponds that do not have any saltwater input. Many species depend on these freshwater resources, including salmon, salamanders, frogs, and beavers. The freshwater habitat is also intricately linked with land use and the terrestrial environment. Sediment runoff, logging, and flood control measures all influence the patterns of freshwater flow and habitat quality.
Source:
Sound Science: Synthesizing ecological and socioeconomic information about the Puget Sound ecosystem. Published 2007. Used by permission.
OVERVIEW
Connections between terrestrial, freshwater, and marine habitats
Freshwater habitat in the Puget Sound region consists of rivers, marshes, streams, lakes and ponds that do not have any saltwater input. Many species depend on these freshwater resources, including salmon, salamanders, frogs, and beavers.
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Washington state aquatic reserves
Eight aquatic reserves, managed by the Washington Department of Natural Resources, have been established to protect important ecosystems on state aquatic lands.
In most reserves, area residents work with state, local and tribal officials and nonprofit groups to develop and carry out management plans, including scientific research.
The aquatic reserves in the order they were established include:
- Maury Island 2004
- Cypress Island 2007
- Fidalgo Bay 2008
- Cherry Point 2010
- Protection Island 2010
- Smith and Minor Islands 2010
- Nisqually Reach 2011
- Lake Kapowsin 2016
Puget Sound River History Project
The Puget Sound River History Project at the University of Washington features historical topographic data for Puget Sound's river systems.
Eyes Over Puget Sound: Surface Conditions Report – June 28, 2018
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Size means survival for young salmon
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How the state assesses low oxygen in Puget Sound
Under the federal Clean Water Act, states are required to assess the quality of their surface waters and compile a list of polluted water bodies. The law mandates cleanup plans to address pollution and other water-quality problems. This article describes how this process works in Washington state for dissolved oxygen.
Are we making progress on salmon recovery?
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State of the salmon in watersheds 2016
A biennial report produced by the Governor's Salmon Recovery Office provides stories and data about salmon, habitat, and salmon recovery in Washington, including Puget Sound.
Urban lifestyles help to protect the Puget Sound ecosystem
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2016 Salish Sea toxics monitoring review: A selection of research
A 2017 report from the Puget Sound Ecosystem Monitoring Program presents an overview of selected recent monitoring and research activities focused on toxic contaminants in the Salish Sea.
Puget Sound Ecosystem Monitoring Program
The Puget Sound Ecosystem Monitoring Program (PSEMP) is an independent program established by state and federal statute to monitor environmental conditions in Puget Sound.
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Finding a strategy to accelerate Chinook recovery
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2015 Puget Sound Marine Waters Overview
The Puget Sound Ecosystem Monitoring Program released its fifth annual Marine Waters Overview this week. The report provides an assessment of marine conditions for the year 2015 and includes updates on water quality as well as status reports for select plankton, seabirds, fish and marine mammals.
Advances in technology help researchers evaluate threatened Puget Sound steelhead
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Mystery remains in deaths of young salmon
The Salish Sea Marine Survival Project has mobilized dozens of organizations in the U.S. and Canada to find an answer to one of the region's greatest mysteries. What is killing so many young salmon before they can return home to spawn? A series of talks at the 2016 Salish Sea Ecosystem Conference brought together some of the latest research.
Protecting Puget Sound watersheds from agricultural pollution using a progressive manure application risk management (ARM) system
Throughout the Puget Sound region, impacted and poorly managed agriculture has been repeatedly advanced as a leading contributor to surface and ground water pollution, particularly during the winter months. A study conducted from 2010 - 2015 aimed to develop an Application Risk Management (ARM) System to minimize pollution from manure in Whatcom County.
Snohomish Basin Protection Plan
A 2015 report from Snohomish County, King County and the Tulalip Tribes outlines protection strategies for salmon and salmon habitat within the Snohomish Basin.
The growing number of species of concern in the Salish Sea suggests ecosystem decay is outpacing recovery
The number of species of concern in the Salish Sea is growing at an average annual rate of 2.6%, according to a report published in the proceedings of the 2016 Salish Sea Ecosystem Conference in Vancouver, B.C.
Conference snapshot: The number of species of concern in the Salish Sea is growing steadily
The number of species of concern in the Salish Sea is growing at an average annual rate of 2.6%, according to a report published in the proceedings of the 2016 Salish Sea Ecosystem Conference in Vancouver, B.C.
Land cover conversion and ecosystem decline
Land cover conversion through human development was listed as a leading cause of ecosystem decline in the 2014 Puget Sound Pressures Assessment, a document supported by the Environmental Protection Agency and prepared by more than 60 of the region's scientists.
Stormwater facts
Runoff from rain and melting snow is one of the leading causes of pollution in Puget Sound. Here are selected facts related to stormwater, its prevalence, how it affects the Puget Sound ecosystem, and its environmental and economic impacts.
Are diseases playing a role in salmon decline?
Chinook, coho and steelhead populations in Puget Sound have declined dramatically over the past 30 years. In some cases, counts of fish returning to the rivers are just a tenth what they were in the 1980s. While many possible causes of this decline are under consideration, some researchers are focusing on the combined effects of predators and disease. This article continues our coverage of the ecological impacts of disease in Puget Sound.
Birch Bay characterization and watershed planning pilot – taking action
A 2015 report from the Whatcom Conservation District and Whatcom County describes a pilot watershed characterization study focusing on the Terrell Creek and Birch Bay areas. The report and related appendices are available for download.
State of Knowledge: Climate Change in Puget Sound
A 2015 report from the University of Washington provides the most comprehensive assessment to date of the expected impacts of climate change on the Puget Sound region.
Guiding growth-healthy watersheds: Woodard Creek Basin water resource protection study
An EPA-funded study by the Thurston Regional Planning Council identified recommended strategies and actions to protect and improve water quality and aquatic resources in the Woodard Creek Basin.
Guiding growth-healthy watersheds: McLane Creek Basin water resource protection study
An EPA-funded study by the Thurston Regional Planning Council identified recommended strategies and actions to protect and improve water quality and aquatic resources in the McLane Creek Basin.
Guiding growth-healthy watersheds: Black Lake Basin water resource protection study
An EPA-funded study by the Thurston Regional Planning Council identified recommended strategies and actions to protect and improve water quality and aquatic resources in the Black Lake Basin.
Persistent contaminants in Puget Sound: Overcoming a toxic legacy
The Lower Duwamish Waterway in Puget Sound was designated a Superfund cleanup site in 2001. Its legacy of contamination predates World War II and the waterway continues to pollute Puget Sound through stormwater runoff.
Puget Sound Fact Book
The Puget Sound Fact Book brings together statistics and other information about the health and makeup of the Puget Sound ecosystem. Areas of focus include climate change, geography, water quality, habitats, human dimensions and regional species. The fact book was prepared for the Encyclopedia of Puget Sound with funding from the Environmental Protection Agency and the Puget Sound Partnership.
Puget Sound: A uniquely diverse and productive estuary
Puget Sound is the second largest estuary in the contiguous United States. Today, we understand that estuaries — where freshwater and saltwater merge — are among the most productive places for life to exist.
2014 state of salmon in watersheds executive summary
This report documents how Washingtonians have responded to the challenges of protecting and restoring salmon and steelhead to healthy status. It also serves as a tool to summarize achievements, track salmon recovery progress through common indicators, and identify data gaps that need to be filled.
Protection and enhancement of riparian buffers in WRIA 7 through restoration and stewardship
The final report on a knotweed removal and native plant project from grant PO-00J08401 to King County DNR for the grant entitled: Protection and enhancement of the riparian buffers in WRIA 7 through restoration and stewardship.
Hansen Creek alluvial fan and wetland restoration project
Habitat restoration was undertaken in 2009-2010 on lower Hansen Creek, Washington. The project converted 140 acres of isolated floodplain into 53 acres of alluvial fan and 87 acres of flow-through wetlands.
Biennial Science Work Plan for 2011-2013
This report, Priority science for restoring and protecting Puget Sound: a Biennial Science Work Plan for 2011-2013, identifies priority science and monitoring questions needed to coordinate and implement effective recovery and protection strategies for Puget Sound.
2012 state of salmon in watersheds executive summary
Salmon recovery demands both dedication among people with different interests, and sustained resources. This biennial report tells the story of the progress made to date and the challenges ahead.
Sound Science 2007
Sound Science: Synthesizing Ecological and Socio-economic Information about the Puget Sound Ecosystem summarizes what we know about the greater Puget Sound ecosystem and what we think could happen in the future given present trajectories and trends.
1990 Puget Sound Update
This is the first annual report of the Puget Sound Ambient Monitoring Program (PSAMP); it briefly describes PSAMP, explains the significance of each type of measurement, and provides initial interpretation of the results.
1991 Puget Sound Update
This is the second annual Puget Sound Update. Findings from the first two years of the Puget Sound Ambient Monitoring Program (PSAMP) form the basis of this report. This report briefly describes PSAMP, explains the significance of each type of monitoring, and discusses the results. It provides some background on the workings of the Puget Sound ecosystem and the history of contamination problems in the Sound.
Puget Sound's Health 1998
In 1996 the Washington State Legislature decided that, in order to effectively target protection efforts in the future, it was time to evaluate how well current efforts to protect Puget Sound are working.
Puget Sound's Health 2000
This is the Puget Sound Water Quality Action Team’s second report on key indicators of Puget Sound’s health. This report has been prepared in response to the Washington State Legislature’s request to evaluate efforts to protect Puget Sound. This second report includes updated information on the 12 indicators originally presented in 1998 as well as information on five new indicators.
Puget Sound's Health 2002
This is the Puget Sound Water Quality Action Team's third report on key indicators of Puget Sound's Health. We prepared the report in response to the Washington State Legislature's request to evaluate efforts to protect Puget Sound. The report includes updated information on the 17 indicators presented in 2000 as well as information on two new indicators.
2011 Salish Sea Ecosystem Conference
The 2011 Salish Sea Ecosystem Conference was held October 25 to 27 at the Sheraton Wall Centre in Vancouver, British Columbia. This event brought together a diverse group of government officials, community leaders, First Nations and tribal members, environmental managers, scientists and academics to learn from each other about the state and threats to the shared ecosystem. Over 950 delegates attended.
Spatial and temporal patterns in smolt survival of wild and hatchery coho salmon in the Salish Sea
Scientists say low marine survival rates threaten Puget Sound coho salmon populations. A 2015 article in the journal Marine and Coastal Fisheries reports that wild cohos in the Salish Sea had higher smolt survival rates over a 30 year period than hatchery coho salmon. Smolt survival in the Strait of Georgia during that time declined faster than it did in Puget Sound.
Time of emergence of climate change signals in the Puget Sound Basin
A December 2014 report from the University of Washington examines when and where climate change impacts will occur in the Puget Sound watershed.
Online resource identifies 'time of emergence' for Puget Sound climate impacts
When and where will we see the impacts of climate change in Puget Sound? A web-based tool factors in dozens of site-specific variables for watersheds throughout the Pacific Northwest. The resource was developed by the University of Washington Climate Impacts Group with support from the EPA, the US Army Corps of Engineers and the Center for Data Science, University of Washington-Tacoma.
New book focuses on the natural history of the Salish Sea
The Salish Sea: Jewel of the Pacific Northwest brings together more than 230 extraordinary images of the Salish Sea. But don't call it a coffee table book. Its lush photos are backed by a serious scientific perspective on this complex and fragile ecosystem.
Ranking the greatest threats to Puget Sound: A summary of the 2014 Puget Sound Pressures Assessment
This paper summarizes a 2014 report ranking the greatest human-caused threats to the Puget Sound ecosystem.
Framework for prioritizing monitoring of CECs in the Pacific Northwest
The Puget Sound Ecosystem Monitoring Program (PSEMP), along with partners from the US EPA Columbia River Program and USGS Oregon Water Science Center, have developed a framework for prioritizing monitoring of Contaminants of Emerging Concern (CECs) in the Pacific Northwest.
Climate change vulnerability and adaptation in the North Cascades Region, Washington
A 2014 report by the North Cascadia Adaptation Partnership identifies climate change issues relevant to resource management in the North Cascades, and recommends solutions that will facilitate the transition of the diverse ecosystems of this region into a warmer climate.
Airport offers a glimpse at tightening stormwater regulations
How does one of the West's busiest airports deal with extreme stormwater, and what does that mean for water quality standards in the rest of the state?
Development of a stormwater retrofit plan for Water Resources Inventory Area (WRIA) 9: Comprehensive needs and cost assessment and extrapolation to Puget Sound
A 2014 King County report projects the capital and maintenance costs of the stormwater treatment facilities that would be needed, within WRIA 9 and the Puget Sound region, to fully comply with the Clean Water Act.
Influence of climate and land cover on river discharge in the North Fork Stillaguamish River
A 2014 report prepared by the Stillaguamish Tribe analyzes potential causes of changes in peak and low flows in the Stillaguamish River basin.
Health of the Salish Sea as measured using transboundary ecosystem indicators
A December 2014 paper in the journal Aquatic Ecosystem Health & Management describes a project to identify transboundary ecosystem indicators for the Salish Sea.
Nature inspires new approach to flood control
Scientists are rethinking floodplain management in Puget Sound. Can we have our farms and salmon too?
Seeking higher calories for Puget Sound killer whales
A 2014 paper decribes how monitoring the energy density of key Pacific salmon species could affect the recovery of northern and southern killer whales through fisheries management.
Monitoring and adaptive management of the Nisqually Delta after tidal marsh restoration: Restoring ecosystem function for salmon
This 2009 report by the Nisqually Tribe establishes key measures of restoration development, habitat processes, and Chinook salmon response for the largest delta restoration project in the Pacific Northwest.
Common, everyday activities now the leading sources of toxics in Puget Sound
New research presented at the 2014 Salish Sea Ecosystem Conference shows that some of the greatest dangers to Puget Sound marine life come from our common, everyday activities. These pervasive sources of pollution are so woven into our lives that they are almost invisible to us, but it’s becoming impossible to ignore their effects.
No salmon left behind: The importance of early growth and freshwater restoration
The growth and survival of young salmon in streams, river deltas and floodplains are seen as crucial pieces of the salmon recovery puzzle. In part two of this two-part series, researchers at the Salish Sea Ecosystem Conference in Seattle say the complexities of the salmon life cycle require new coordination among scientists.
Declines in marine birds trouble scientists
Why did all the grebes leave? Where did they go? And what does their disappearance say about the health of the Salish Sea? Seasonal declines among some regional bird species could hold important clues to the overall health of the ecosystem.
Special issue of Coastal Management focuses on social sciences in Puget Sound recovery
The July 2014 issue of the journal Coastal Management focuses on the role of social sciences in Puget Sound ecosystem recovery. Articles range from political ecology to the development of human wellbeing indicators and directly address current Puget Sound restoration efforts. Guest editors include Encyclopedia of Puget Sound topic editor Kelly Biedenweg and Puget Sound Science Panel co-chair Katharine Wellman. The journal is co-edited by Patrick Christie of our editorial board. Extended abstracts of the articles will be available on these pages in coming weeks.
Benthic Invertebrates of Puget Sound
A list of over 1800 benthic infaunal invertebrates is now available on the Encyclopedia of Puget Sound. The list was prepared as part of the Washington State Department of Ecology’s Marine Sediment Monitoring Program (MSMP). This program, initiated in 1989, is one component of the Puget Sound Ecosystem Monitoring Program, a collaborative effort dedicated to monitoring environmental conditions in Puget Sound.
Spatial and Temporal Variation in River Otter (Lontra canadensis) Diet and Predation on Rockfish (Genus Sebastes) in the San Juan Islands, Washington
A 2014 paper in the journal Aquatic Mammals examines coastal river otter predation on rockfish at three islands in the Salish Sea.
Species of Concern within the Salish Sea nearly double between 2002 and 2013
Approximately every two years, the SeaDoc Society prepares a list of species of concern within the Salish Sea ecosystem. The following paper found 119 species at risk and was presented as part of the proceedings of the 2014 Salish Sea Ecosystem Conference, April 30 – May 2, 2014, Seattle, Washington.
Regional monitoring of CECs in the Salish Sea
Several studies have been performed to determine the occurrence of selected Contaminants of Emerging Concern (CECs) in the environment.
Contaminants of emerging concern in the Salish Sea
Thousands of different compounds are produced and used as part of our daily lives. Examples include pharmaceuticals (NSAIDs, birth control pills, etc), personal care products (sun screen agents, scents, preservatives, etc), food additives (artificial sweeteners) and compounds used in industrial and commercial applications (flame retardants, antibiotics, etc). Advances in analytical methods have allowed the detection of many of these compounds in the environment.
Measuring Socio-Cultural Values Associated with Salmon in the Quinault Indian Nation
A 2014 report describes a study of socio-cultural values associated with blueback salmon in the Quinault Indian Nation. The blueback salmon (Oncorhynchus nerka) is a unique strain of sockeye that returns primarily to the Quinault river system.
Marine and terrestrial bird indicators for Puget Sound
A December 2013 report identifies marine and terrestrial bird species for use as indicators within the Puget Sound Partnership's "Vital Signs" for ecosystem health.
Making science useful in complex political and legal arenas: A case for frontloading science in anticipation of environmental changes to support natural resource laws and policies
Climate change impacts and adaptations in Washington State: Technical summaries for decision makers
A December 2013 report by the University of Washington Climate Impacts Group projects wide reaching change for the Puget Sound ecosystem and the Pacific Northwest. Lead author: Encyclopedia of Puget Sound climate change topic editor Amy Snover.
Puget Sound salmonid habitat monitoring inventory and recommendations
An October 2013 report released by the Puget Sound Ecosystem Monitoring Program inventories and assesses monitoring activities of Puget Sound's ESA-listed salmon and steelhead stocks and habitats.
Exhibit traces Elwha restoration
The Encyclopedia of Puget Sound spoke with Seattle Times reporter Lynda Mapes about the exhibit Elwha: A River Reborn, which opened at the University of Washington Burke Museum on November 23rd. The exhibit is based on the book of the same title by Mapes and photographer Steve Ringman, and tells the story of the largest dam removal in U.S. history.
Developing human wellbeing indicators for the Hood Canal watershed
Toxics research that changed Puget Sound history
In the 1970s and 1980s, research from a division of NOAA's Montlake Lab suddenly changed the way scientists and the public viewed the health of Puget Sound. Their discovery of industrial toxics in the region's sediment-dwelling fish led to the creation of two Superfund sites, and new approaches to ecosystem management across the Sound. The man at the forefront of this research was Dr. Donald Malins, featured here as part of the Puget Sound Voices series.
Paper: Citizen science reveals an extensive shift in the winter distribution of migratory Western Grebes
A June 19, 2013 paper in the journal PLoS ONE hypothesizes that regional declines in Western Grebe populations may be related to decreasing numbers of forage fish. Using citizen science data from 36 years of bird counts, researchers were able to look at population trends up and down the entire West Coast, finding that abundance of grebes decreased in the Salish Sea but increased in southern California. North American population declined by 52% overall.
Suspended-sediment concentrations during dam decommissioning in the Elwha River, Washington
This document was prepared by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency and the National Park Service. Download the entire report, or read the Introduction below. Portions of this document were originally published in June 2013 and were updated in February 2014.
Puget Sound Voices: scuba pioneer
Vern Morgas remembers the early days of scuba diving in Puget Sound.
NOAA report establishes Chinook monitoring framework
A new Chinook monitoring framework is designed to build cooperation among managers and policymakers working across the Puget Sound watershed. The report, prepared by an independent team of scientists and released by NOAA, includes a regionally specific, common classification system for Chinook habitats and key ecological attributes.
Puget Sound Chinook Salmon recovery: a framework for the development of monitoring and adaptive management plans
The Puget Sound Recovery Implementation Technical Team has released a draft of a NOAA technical memorandum describing frameworks for adaptive management and monitoring of Chinook salmon in Puget Sound. Download the report.
Oregon Spotted Frog (Rana pretiosa)
This article was originally published by the Washington Department of Fish and Wildlife as part of its annual report Threatened and Endangered Wildlife in Washington.
Reports: Sauk-Suiattle amphibian surveys
The Sauk-Suiattle Indian Tribe conducts annual surveys of amphibian egg masses in the Reservation Slough wetland near the Sauk River.
Report: The effects of salmon fisheries on Southern Resident Killer Whales
A recent report by an independent science panel reviewed data on the effects of salmon fisheries on Southern Resident Killer Whale populations. The report was released on November 30, 2012 and was commissioned by NOAA Fisheries and Oceans Canada.
Salmonids in Puget Sound
Fish in the family Salmonidae (salmon, trout, and charr) play potentially integral roles in the upland freshwater, nearshore and pelagic marine ecosystems and food webs of Puget Sound.
Report: 2012 State of Our Watersheds
The State of Our Watersheds Report is produced by the treaty tribes of western Washington, and seeks to present a comprehensive view of 20 watersheds in the Puget Sound region and the major issues that are impacting habitat.
Featured resource: Puget Sound Stream Benthos
Puget Sound Stream Benthos is a data management project which monitors benthic invertebrates in streams and rivers in the Puget Sound region. The system is maintained and operated by King County and was the result of a joint effort between King, Pierce, and Snohomish Counties.
King County wetland habitat
Wetlands are recognized as critical ecosystems for biodiversity because of their disproportional use by wildlife and exceptional habitats for plants. It is their unique combination of shallow aquatic habitats and adjacent terrestrial conditions extending over a wide range of geomorphic and elevational settings that accounts for their ecological complexity and resultant richness. Because of their landscape setting, each wetland tends to exhibit unique habitat types and characteristic arrays of species adapted to idiosyncratic conditions, products of each wetland’s ecological and evolutionary history.
King County rivers and streams
The diversity of streams in the county is a reflection of the diversity of its geography. From the small rivulets that begin high in the Cascade Mountains, to the brooks that flow gently across the lowlands, to the five major rivers of the county, there are over 4,800 kilometers (3,000 miles) of perennial streamcourses in King County.
King County riparian habitat
Riparian habitats are often characterized by particular trees and shrub species that line the banks of most rivers and streams in the lowlands and foothills of King County.
King County lake habitat
The natural biodiversity of the lakes of King County is strongly influenced by geography. The county runs from the Cascade mountain crest to the shores of Puget Sound, covering all three different Level III ecoregions (Puget Lowland, North Cascade, and Cascade). The geology, elevation, climate, and ecology in these three ecoregions are all different, and these differences in environmental factors determine the natural biodiversity of the lakes and also influence the risks, vulnerability, and impacts to that biodiversity.
Red-legged frogs in the Puget Sound watershed
The Northern Red-legged Frog is described here relative to its local behavior, habitat, threats and morphology.
Marine fecal bacteria
Fecal bacteria are found in the feces of humans and other homeothermic animals. They are monitored in recreational waters because they are good indicators of harmful pathogens that are more difficult to measure.
Intentional and unintentional introduction of invasive and non-native species
Non-native species are those that do not naturally occur in an ecosystem. A non-native species is considered invasive when it is capable of aggressively establishing itself and causing environmental damage to an ecosystem. Plants, animals, and pathogens all can be invasive.