“Our studies are looking at what is in the drift and what is in the diet of fish,” Kiffney said.
Researchers are able to describe what the fish are eating under various temperatures and habitat conditions by pumping water into their stomachs and examining what comes out. This procedure allows researchers to safely release the fish back into the river. Such work is taking place not only throughout the Snoqualmie watershed but in many other streams throughout the Northwest.
“Juvenile salmon and trout are visual foragers,” Kiffney said. “They’re primarily eating invertebrates (such as stoneflies and mayflies). Some will eat small fish.”
Through careful studies, Kiffney and his fellow researchers are hoping to estimate the amount of food available to fish at a given time and place. This way they can measure the influence of overall food supply on the growth and survival of salmonids.
As the temperature goes up, invertebrates may also grow faster, provided they have access to their own foods, such as algae in the water. But if one part of the food web is missing or develops at the wrong time, it can throw off growth, migration or survival for salmon.
“We know the temperature is going up,” said Kiffney, “but we don’t really know how the invertebrates are going to react. I’m really curious to get at that question.”
Different populations of invertebrates emerge at different times, and some years are more productive than others for a variety of reasons. In certain periods, such as early summer, one may see “lots of bugs flying above the water,” as different species overlap in their development, Kiffney said.
As temperatures warm in a river, juvenile salmonids may look for cooler water in the upper reaches of a stream, closer to melting snow or glaciers. But will they find food in these areas? The answer may well depend on the availability of sunlight and nutrients to produce the algae needed to feed the invertebrates that feed the fish.
Unlike old-growth forests, some of the younger stands of managed forest far upstream contain buffers that, while keeping the water cool, block out sunlight. In such cases, making small cuts to open the tree canopy can improve productivity in the food web, Kiffney said. Meanwhile, it is well understood that most downstream areas are not lacking for sunlight, far from it.
Sometimes in these upper streams the problem is a lack of nutrients, which can be supplied by artificially adding salmon carcasses to mimic a productive salmon run, Kiffney said. These are temporary measurers at best, he added, and finding ways to restore salmon runs would be the best option.
At the same time, fish are able to eat terrestrial insects that get blown into the streams from surrounding vegetation. With higher nitrogen levels, terrestrial insects are often more nutritious than aquatic invertebrates.
When considering salmon recovery, a key question is what can be done to restore the food supply, including the possibility of planting trees or vegetation that can make the food web more resilient to climate change. It is a balancing act, scientists say, and studies that explain what food is available in streams and what fish are actually eating could help to answer questions essential to salmon recovery.
“We need some general strategies,” Kiffney said, “and we’re not there yet.”
Shining a light on the future
Thanks to a surge in technology, scientists are now able to map out temperature changes across an entire river system, such as the Snoqualmie. In the process, they are gaining an understanding about the stresses that fish must endure, especially during periods of extreme heat.
As a changing climate brings increasing stream temperatures throughout the Northwest, one challenge for humans is to help salmon escape from deadly temperatures, perhaps by securing cool-water refuges along their river route.
Using temperature as a surrogate for fish behavior, researchers can predict not only where fish in the river are likely to be, but also the best places for fish to hang out when no fish are present.
For the past decade, NOAA’s Northwest Fisheries Science Center has been monitoring the stream temperature along the Snoqualmie and its tributaries. With 45 temperature data loggers taking measurements every half hour, researchers can piece together an overall story about how warm waters in one part of the river move downstream and mix with incoming flows to influence temperatures throughout the system.
Although 45 temperature sensors produce a lot of data — 2,160 readings per day — these sensors alone cannot reveal what is happening along the miles and miles of river between them. That’s where computer modeling and remote temperature sensing from aircraft can play a role.
One type of model, called a spatial stream network model, accounts for the branchlike network of tributaries that combine their flows as the river moves toward the sea. In a modeling project led by Amy Marsha, researchers incorporated 23 known characteristics of flow and land use throughout the Snoqualmie watershed.
From the 45 sites where temperatures were measured precisely, the model estimated concurrent temperatures throughout the day for 1,219 closely spaced locations throughout the system.
Taking the project a step further, Marsha and her colleagues were able to describe where salmon and trout might spend the most time, given the changing water temperatures. They also located places where the fish might face peril from predators trying to eat them.
“These models are temperature based,” Marsha emphasized. “We can apply these models to inform us about fish behavior, but we are not modeling fish.”
While other researchers increase their efforts to study the behavior of fish directly or by tracking them with sophisticated “tags” embedded or attached to fish, such studies have proven to be challenging, expensive and geographically limited. Using temperature as a surrogate for fish behavior, researchers can predict not only where fish in the river are likely to be, but also the best places for fish to hang out when no fish are present.
In a study published Feb. 12 in the journal Freshwater Science, Marsha looked for parts of the Snoqualmie River where suitable temperatures were seen for the various life stages of Chinook salmon, bull trout and largemouth bass — the latter a non-native fish found in the river and known to eat juvenile salmonids.
The model proved to be a reasonable way to search for places where salmon would likely hang out, based on temperature. It also revealed places where salmon would not like to stay. When combined with other habitat conditions, the model can point to places where restoration might make a real difference for salmon survival.
Another approach is to protect habitat where the temperature was shown to be suitable for salmon but too cold for warm-water predators, such as bass. In a similar fashion, one can now search for locations where conflicts between bass and salmon are most likely to occur.
“For example,” the report states, “we determined that major lowland reaches of the Snoqualmie River basin are thermally suitable for both native Chinook salmon and non-native largemouth bass during juvenile rearing.” Such areas may support increased predation of salmon by bass, increased competition between the species or reduced salmon growth and survival as a result of stress.
To better protect salmon in areas of potential conflict, habitat managers could propose targeted programs to reduce non-native bass populations, researchers say.
In a separate project that could help foretell the effects of climate change on the Snoqualmie watershed, Marsha joined a research team led by Ashley Steel of the U.S. Forest Service that looked into the extreme heat wave of 2015. Applying the spatial stream network model, they estimated temperatures throughout the Snoqualmie based on actual readings taken in 2015.
Their findings, published in the Canadian Journal of Fisheries and Aquatic Sciences, showed a remarkable divergence from typical climate-change predictions, which often assume constant temperature increases throughout a river network.
As described in a 2018 article about the research, “Some locations showed dramatic increases in air and water temperature, whereas others had temperatures that differed little from typical years; these results contrasted with existing forecasts of future thermal landscapes.
“If we will observe years like 2015 more frequently in the future, we can expect conditions to be less favorable to native, cool-water fishes such as Chinook salmon and bull trout but beneficial to warm-water nonnative species such as largemouth bass.”
Climate change is expected to bring more frequent heat waves, such as the one in 2015 and again this year — although warm-water conditions this summer have not matched those of 2015, despite the record-breaking air temperatures. One difference may be the increased snowpack over the past winter. Still, climate change is expected to bring an increasing frequency of extreme weather, and stream models could reveal just how harsh conditions may get in the Snoqualmie and other systems where studies are taking place.
Speedy measurements and next steps
Another technology that adds a powerful new dimension to stream-temperature studies is thermal infrared sensing using equipment mounted on small airplanes and helicopters. Remote sensing can provide colorful images of a river, with red and orange blotches often representing warm water and whisps of turquoise and blue accentuating cooler flows coming from tributaries and springs.
In the Snoqualmie, a helicopter carrying thermal imaging equipment was able to cover the entire river in a single day in August 2020. This kind of equipment detects infrared radiation coming off the water, and those measurements can be converted to temperature.